Systems biology short course : Integration of multi‐omics data for biomedical and nutritional applications - Sciencesconf.org

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09:00 10:00 11:00 12:00 13:00 14:00 15:00 16:00 17:00 18:00 19:00 20:00 21:00 22:00	Introduction/Principles of Systems Biology 9:00 - 10:30 (1h30) Introduction/Principles of Systems Biology Coffee break 10:30 - 10:45 (15min) Coffee break Principles of COBRA I 10:45 - 12:15 (1h30) Principles of COBRA I Lunch 12:15 - 13:15 (1h) Lunch Principles of COBRA II 13:15 - 14:45 (1h30) Principles of COBRA II Coffee break 14:45 - 15:00 (15min) Coffee break Reconstruction methods and principles 15:00 - 17:00 (2h) Reconstruction methods and principles	Modeling human metabolism 9:00 - 10:30 (1h30) Modeling human metabolism Coffee break 10:30 - 10:45 (15min) Coffee break Genome-scale reconstruction of the human microbiome 10:45 - 12:15 (1h30) Genome-scale reconstruction of the human microbiome Lunch 12:15 - 13:15 (1h) Lunch Introduction to MATLAB, installation 13:15 - 14:45 (1h30) Introduction to MATLAB, installation Coffee break 14:45 - 15:00 (15min) Coffee break Flux balance analysis (tutorial) 15:00 - 17:00 (2h) Flux balance analysis (tutorial)	Applications in microbiome research 9:00 - 10:30 (1h30) Applications in microbiome research Coffee break 10:30 - 10:45 (15min) Coffee break Methods for modeling microbiome interactions 10:45 - 12:15 (1h30) Methods for modeling microbiome interactions Lunch 12:15 - 13:15 (1h) Lunch Personalized modeling of the microbiome (tutorial) 13:15 - 14:45 (1h30) Personalized modeling of the microbiome (tutorial) Coffee break 14:45 - 15:00 (15min) Coffee break Personalized modeling of the microbiome (tutorial) 15:00 - 17:00 (2h) Personalized modeling of the microbiome (tutorial)	Modeling disease states 9:00 - 10:30 (1h30) Modeling disease states Coffee break 10:30 - 10:45 (15min) Coffee break Contextualization of Metabolic Network Models and their Application to Drug Repurposing 10:45 - 12:15 (1h30) Contextualization of Metabolic Network Models and their Application to Drug Repurposing Lunch 12:15 - 13:15 (1h) Lunch Integrating omics data with FASTCORE (tutorial) 13:15 - 14:45 (1h30) Integrating omics data with FASTCORE (tutorial) Coffee break 14:45 - 15:00 (15min) Coffee break Integrating omics data with FASTCORE (tutorial) 15:00 - 17:00 (2h) Integrating omics data with FASTCORE (tutorial) Visit of Nancy's St. Nicolas market 20:00 - 22:00 (2h) Visit of Nancy's St. Nicolas market	Lessons for integrating meta-data into the statistical analyses of COBRA models 9:00 - 10:30 (1h30) Lessons for integrating meta-data into the statistical analyses of COBRA models Coffee break 10:30 - 10:45 (15min) Coffee break Applications in precision medicine 10:45 - 12:15 (1h30) Applications in precision medicine Lunch 12:15 - 13:15 (1h) Lunch Round table 13:15 - 14:45 (1h30) Round table Coffee break 14:45 - 15:00 (15min) Coffee break